BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A01LP1|AL428470
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1122 1690 0.0
>3x_Contig1122
Length = 4483
Score = 1690 bits (835), Expect = 0.0
Identities = 873/903 (96%), Gaps = 1/903 (0%)
Strand = Plus / Minus
Query: 23 gatcggggaagaaagaaaaaaatgtaattagcacttattatactatgaaaacccagtaaa 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3884 gatcggggaagaaagaaaaaaatgtaattagcacttattatactatgaaaacccagtaaa 3825
Query: 83 aaaaaaaaaaaatgctgttctgctgattcttacgattccttatttcttctcgtaagggta 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3824 aaaaaaaaaaaatgctgttctgctgattcttacgattccttatttcttctcgtaagggta 3765
Query: 143 aaaaaaamwatgttcactctggtttcaaawagaagaaaaawawacacgctgkgttgaaac 202
||||||| |||||||||||||||||||| |||||||||| | |||||||| ||||||||
Sbjct: 3764 aaaaaaactatgttcactctggtttcaaatagaagaaaaatatacacgctgtgttgaaac 3705
Query: 203 tgataccgtaccctgagagtgtgtgtgtatgcgtatgtgcgtatgtattcagagttctct 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3704 tgataccgtaccctgagagtgtgtgtgtatgcgtatgtgcgtatgtattcagagttctct 3645
Query: 263 tttgcaaacaaaagcccttatgtcagtttgaaaggagaccttgtactagttcctggtaat 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3644 tttgcaaacaaaagcccttatgtcagtttgaaaggagaccttgtactagttcctggtaat 3585
Query: 323 tccagttaaatgtccaatgaagagkgcaaagkaggaaagaaagcactctcgttggtttcc 382
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 3584 tccagttaaatgtccaatgaagagtgcaaagtaggaaagaaagcactctcgttggtttcc 3525
Query: 383 gaaaattaagtatactggkttaccccaaagggaaaaccgcacaaaggggaaagaattgga 442
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3524 gaaaattaagtatactggtttaccccaaagggaaaaccgcacaaaggggaaagaattgga 3465
Query: 443 aactctcagtaccaaaaatgtcaaragctaaaaraagcggcgatagttctktctcactga 502
|||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||
Sbjct: 3464 aactctcagtaccaaaaatgtcaagagctaaaagaagcggcgatagttctgtctcactga 3405
Query: 503 tggktggrattagtgtacttagggragtcgagtttgaaatactgcgggaagtgggatgtt 562
||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3404 tggttggaattagtgtacttagggaagtcgagtttgaaatactgcgggaagtgggatgtt 3345
Query: 563 gccagtagagaaggcaggtaattaattctttcttkaattgctctttttcgtttttcagtt 622
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3344 gccagtagagaaggcaggtaattaattctttcttgaattgctctttttcgtttttcagtt 3285
Query: 623 tcatttatgcgtagaaagggkctgcaatgacggsagcgtctttcascctgamttamatgt 682
|||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||| ||||
Sbjct: 3284 tcatttatgcgtagaaagggtctgcaatgacggcagcgtctttcagcctgaattaaatgt 3225
Query: 683 mcgttgtatgtaggtatgtaggtatatcatctggrgagcatgtatttatagagcattatg 742
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3224 acgttgtatgtaggtatgtaggtatatcatctggagagcatgtatttatagagcattatg 3165
Query: 743 tctaggaaaaccaccaccgcgcagtaaattccaatgactttcagtttactagtctccggk 802
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3164 tctaggaaaaccaccaccgcgcagtaaattccaatgactttcagtttactagtctccggt 3105
Query: 803 tgggkgttaattgcatggtcggcatctgcttkcactgttggaagtggtgttggaggkggt 862
|||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 3104 tgggtgttaattgcatggtcggcatctgcttgcactgttggaagtggtgttggaggtggt 3045
Query: 863 gttggcgttgatgatatggattcc-cctgtaaaagctcgatgtccggattcawtttgggt 921
|||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||
Sbjct: 3044 gttggcgttgatgatatggattcctcgtgtaaaagctcgatgtccggattcaatttgggt 2985
Query: 922 ttt 924
|||
Sbjct: 2984 ttt 2982
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,644
Number of Sequences: 1807
Number of extensions: 14644
Number of successful extensions: 3120
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)